CDS

Accession Number TCMCG015C13973
gbkey CDS
Protein Id XP_027111582.1
Location complement(join(9433815..9434046,9434151..9434204,9434926..9435029,9435230..9435379,9436037..9436171,9436765..9436854,9437455..9437712,9437801..9437877,9438634..9438694,9439057..9439221,9439354..9439635,9440454..9440633,9440761..9440784))
Gene LOC113730835
GeneID 113730835
Organism Coffea arabica

Protein

Length 603aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027255781.1
Definition tyrosyl-DNA phosphodiesterase 1-like isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category L
Description Tyrosyl-DNA phosphodiesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10862        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000012        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008081        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0017005        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070259        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTATATCCAACTCTCCTCGGGTGGGATTTCTGCAGCCATTGAACAAAGTAGGGCAAGAAGAGAGCTCAATTCCCAAAATATTACTATCTAAAGGGCTCAATGTTGTTGGCCGGAATTGCATTCCAGTCACTGATAAACGCCTCAGCCGGAAGCATCTCAGCATTAATGTTGCCTCCGATGGCTCTAGCGAAGTCTCTGTGGAAGGAACAAACCCTGTTGTTCTAAGAACTAAGGGTGAAAGGAAGAAGCTTTTATCTGGAGAGAAATGGAAAATTGAGGATGGTGATATTATAGAGTTGATACCTGGCCACTACTTTTTGAAGTATGTAGCTTCTGGTGGTGAGAAAAATGAAAAGTTAATGAGTAATAAGCAGAAAAGGTGTTGGGATGAAGAAAGTAGTTATAGCAAAGACAGGGTTCGTAATAAGAAGACAATCAACGGTGAATCTGAATTGGAACCTCTGGCTGAACAATCAAAAAAGAAACGGTTTGAGAATAATGGCAAGGAAACAGATAAATCTTCGGAGGGTATTCGTCAATTTAATGTTCCTAATTCTAAGTTACCGTCAACTTTTCGATTATTACGGGTGCAAGGGCTGCCAGCATGGGCTAATACTAACACGGTCTCAATCAATGACGTGATTCAGGGAAATGTTATTCTTGCTATACTTTCTAATTACATGGTGGACATCGATTGGCTACTTTCTGCATGTCCTCTGCTTAAAAAAGTGCCTAATGTTTTGGTCATCCATGGAGAGAGTGATGGCATACTGGAGTACATGAAGAGAAAAAAGCCTGCAAGTTGGATCCTTCACAAACCTCCATTACCAATTTCATTTGGAACACATCATTCCAAAGCTATGCTTCTTGTCTATCCTCAAGGAGTAAGGGTTGTTGTGCATACGGCAAATTTGATACACGTTGATTGGAATAACAAGAGCCAAGGCCTGTGGATGCAAGATTTTCCGTGGAAGGATAATAACGGTGCAAGCAAAGGATGTGGTTTTGAAAGCGATTTAATTGATTATCTGACCATGTTAAAGTGGCCAGAATTCAATGTTGATTTACCTGCTCTTGGCAGTTACAGTATTAAGCCTTCATTCTTCAAAAAGTTTGATTACACCAGTGCAGTGGTCAGGCTAATTGCATCAGTCCCTGGATATCATTCAGGTTCCAATTTAAAAAAGTGGGGACATATGAAGTTACGTACTGTGCTTCAGGAGTGTACTTTCAGTGAGGAGTTCCAAAAATCTCCTCTTGTTTACCAGTTTTCTTCCCTAGGTTCTTTGGATGAGAAGTGGATGTTGGAATTTGCATCATCTATGAGTGCTGGAGTTACAAGAGATAAAAAGCCCCTTGGGGTAGGGGAGCCATTAATAATATGGCCAACAGTGGAAGATGTCAGAAATTCTTTAGAGGGATATGCAGCTGGAAATGCCATTCCAAGTCCACTAAAGAATGTGGAGAAAGCATTTCTGAAAAAATATTGGGCAAAATGGAAGGCTAACCATAGTGGTCGCTGTCGTGCAATGCCTCACATAAAGACATTCACGCGGTATAATGGCCAAAATCTTGCGTGGTTCTTGCTCACTTCAGCCAACCTCAGCAAAGCTGCCTGGGGGGCTCTTCAGAAAGGCAATTCCCAGCTGATGATCCGTTCCTATGAGGTATCTTTATTCTTTGGAGATACTTCATCGAGGTTATGTGCAATGATGAAATGCAATATAGTTTATCATACTTTTTATTGCCCTTCTCTATCTCATGACTATCAATTGAGCATAACATCTCTAGATGTCTCTTTAGATTAG
Protein:  
MSISNSPRVGFLQPLNKVGQEESSIPKILLSKGLNVVGRNCIPVTDKRLSRKHLSINVASDGSSEVSVEGTNPVVLRTKGERKKLLSGEKWKIEDGDIIELIPGHYFLKYVASGGEKNEKLMSNKQKRCWDEESSYSKDRVRNKKTINGESELEPLAEQSKKKRFENNGKETDKSSEGIRQFNVPNSKLPSTFRLLRVQGLPAWANTNTVSINDVIQGNVILAILSNYMVDIDWLLSACPLLKKVPNVLVIHGESDGILEYMKRKKPASWILHKPPLPISFGTHHSKAMLLVYPQGVRVVVHTANLIHVDWNNKSQGLWMQDFPWKDNNGASKGCGFESDLIDYLTMLKWPEFNVDLPALGSYSIKPSFFKKFDYTSAVVRLIASVPGYHSGSNLKKWGHMKLRTVLQECTFSEEFQKSPLVYQFSSLGSLDEKWMLEFASSMSAGVTRDKKPLGVGEPLIIWPTVEDVRNSLEGYAAGNAIPSPLKNVEKAFLKKYWAKWKANHSGRCRAMPHIKTFTRYNGQNLAWFLLTSANLSKAAWGALQKGNSQLMIRSYEVSLFFGDTSSRLCAMMKCNIVYHTFYCPSLSHDYQLSITSLDVSLD